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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs6010023 chr22:51028202 C/T 9.39E-9 479 15.63 18.47 17.47 KM Plot
THCA rs60152343 chr8:52444193 A/G 0.000188 483 16.37 14.67 9.95 KM Plot
THCA rs60176637 chr19:43583306 G/T 0.000233 487 15.3 18.93 10.08 KM Plot
THCA rs60181496 chr4:3364388 C/G 7.81E-6 481 11.78 15.18 16.87 KM Plot
THCA rs60192551 chr2:201999363 T/TTAAAATAAAA 0.000216 484 16.2 15.7 10.28 KM Plot
THCA rs60195140 chr17:57439421 A/G 9.68E-6 485 16.2 15 15.17 KM Plot
THCA rs60197694 chr4:3154111 T/C 0.000189 488 16.95 13.97 15.23 KM Plot
THCA rs60208975 chr4:3364530 A/G 1.01E-5 479 12.08 15.63 16.83 KM Plot
THCA rs60214909 chr2:196749504 G/A 1.34E-7 490 15.9 15.95 12.08 KM Plot
THCA rs60226837 chr6:167578842 G/A 0.000213 489 16.23 14.9 12.72 KM Plot
THCA rs60228566 chr6:119268107 G/GGACTT 0.000299 488 16.37 14.27 21.77 KM Plot
THCA rs60265677 chr9:95850584 G/A 2.11E-6 487 15.7 17.63 16.57 KM Plot
THCA rs60266249 chr2:29065869 C/CA 9.57E-5 490 14.98 17.03 15.9 KM Plot
THCA rs60310593 chr9:132299876 C/CAA 0 486 16.2 15.17 9.57 KM Plot
THCA rs60388194 chr16:20773244 T/C 3.38E-5 490 16.37 14.63 17.65 KM Plot